IL_8GHU_017
3D structure
- PDB id
- 8GHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methyltransferase RmtC bound to the 30S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAGGGA*UCAUUGAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8GHU_017 not in the Motif Atlas
- Homologous match to IL_6CZR_131
- Geometric discrepancy: 0.5305
- The information below is about IL_6CZR_131
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30149.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8GHU|1|a|G|450
8GHU|1|a|A|451
8GHU|1|a|A|452
8GHU|1|a|G|453
8GHU|1|a|G|454
8GHU|1|a|G|455
8GHU|1|a|A|456
*
8GHU|1|a|U|476
8GHU|1|a|C|477
8GHU|1|a|A|478
8GHU|1|a|U|479
8GHU|1|a|U|480
8GHU|1|a|G|481
8GHU|1|a|A|482
8GHU|1|a|C|483
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain p
- 30S ribosomal protein S16
Coloring options: