IL_8GHU_021

3D structure

PDB id

8GHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methyltransferase RmtC bound to the 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUGUUAA*UGGCAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GHU|1|a|U|589
8GHU|1|a|U|590
8GHU|1|a|U|591
8GHU|1|a|G|592
8GHU|1|a|U|593
8GHU|1|a|U|594
8GHU|1|a|A|595
8GHU|1|a|A|596
*
8GHU|1|a|U|644
8GHU|1|a|G|645
8GHU|1|a|G|646
8GHU|1|a|C|647
8GHU|1|a|A|648
8GHU|1|a|A|649
8GHU|1|a|G|650

Current chains

Chain a

16S rRNA

Nearby chains

Chain h

30S ribosomal protein S8

Chain o

30S ribosomal protein S15

Chain q

30S ribosomal protein S17