3D structure

PDB id
8GHU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Methyltransferase RmtC bound to the 30S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UAGAAUU*AGGAAUACCGGUGGCGAAGGCGG
Length
30 nucleotides
Bulged bases
8GHU|1|a|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8GHU|1|a|U|672
8GHU|1|a|A|673
8GHU|1|a|G|674
8GHU|1|a|A|675
8GHU|1|a|A|676
8GHU|1|a|U|677
8GHU|1|a|U|678
*
8GHU|1|a|A|712
8GHU|1|a|G|713
8GHU|1|a|G|714
8GHU|1|a|A|715
8GHU|1|a|A|716
8GHU|1|a|U|717
8GHU|1|a|A|718
8GHU|1|a|C|719
8GHU|1|a|C|720
8GHU|1|a|G|721
8GHU|1|a|G|722
8GHU|1|a|U|723
8GHU|1|a|G|724
8GHU|1|a|G|725
8GHU|1|a|C|726
8GHU|1|a|G|727
8GHU|1|a|A|728
8GHU|1|a|A|729
8GHU|1|a|G|730
8GHU|1|a|G|731
8GHU|1|a|C|732
8GHU|1|a|G|733
8GHU|1|a|G|734

Current chains

Chain a
16S rRNA

Nearby chains

Chain f
30S ribosomal protein S6, non-modified isoform
Chain o
30S ribosomal protein S15
Chain r
30S ribosomal protein S18

Coloring options:

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