IL_8GHU_039

3D structure

PDB id

8GHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methyltransferase RmtC bound to the 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAGGAAGGGAG*CUCAUUGACGUUAC

Length

26 nucleotides

Bulged bases

8GHU|1|a|A|451, 8GHU|1|a|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GHU|1|a|G|446
8GHU|1|a|G|447
8GHU|1|a|A|448
8GHU|1|a|G|449
8GHU|1|a|G|450
8GHU|1|a|A|451
8GHU|1|a|A|452
8GHU|1|a|G|453
8GHU|1|a|G|454
8GHU|1|a|G|455
8GHU|1|a|A|456
8GHU|1|a|G|457
*
8GHU|1|a|C|475
8GHU|1|a|U|476
8GHU|1|a|C|477
8GHU|1|a|A|478
8GHU|1|a|U|479
8GHU|1|a|U|480
8GHU|1|a|G|481
8GHU|1|a|A|482
8GHU|1|a|C|483
8GHU|1|a|G|484
8GHU|1|a|U|485
8GHU|1|a|U|486
8GHU|1|a|A|487
8GHU|1|a|C|488

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16