3D structure

PDB id
8GHU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Methyltransferase RmtC bound to the 30S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GCACGCAG*UCAGGUGC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8GHU|1|a|G|577
8GHU|1|a|C|578
8GHU|1|a|A|579
8GHU|1|a|C|580
8GHU|1|a|G|581
8GHU|1|a|C|582
8GHU|1|a|A|583
8GHU|1|a|G|584
*
8GHU|1|a|U|757
8GHU|1|a|C|758
8GHU|1|a|A|759
8GHU|1|a|G|760
8GHU|1|a|G|761
8GHU|1|a|U|762
8GHU|1|a|G|763
8GHU|1|a|C|764

Current chains

Chain a
16S rRNA

Nearby chains

Chain h
30S ribosomal protein S8
Chain l
30S ribosomal protein S12
Chain o
30S ribosomal protein S15
Chain q
30S ribosomal protein S17

Coloring options:

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