3D structure

PDB id
8GHU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Methyltransferase RmtC bound to the 30S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CUUGGAGG*CUUCCGGAGCUAACGCGUUAAG
Length
30 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8GHU|1|a|C|826
8GHU|1|a|U|827
8GHU|1|a|U|828
8GHU|1|a|G|829
8GHU|1|a|G|830
8GHU|1|a|A|831
8GHU|1|a|G|832
8GHU|1|a|G|833
*
8GHU|1|a|C|853
8GHU|1|a|U|854
8GHU|1|a|U|855
8GHU|1|a|C|856
8GHU|1|a|C|857
8GHU|1|a|G|858
8GHU|1|a|G|859
8GHU|1|a|A|860
8GHU|1|a|G|861
8GHU|1|a|C|862
8GHU|1|a|U|863
8GHU|1|a|A|864
8GHU|1|a|A|865
8GHU|1|a|C|866
8GHU|1|a|G|867
8GHU|1|a|C|868
8GHU|1|a|G|869
8GHU|1|a|U|870
8GHU|1|a|U|871
8GHU|1|a|A|872
8GHU|1|a|A|873
8GHU|1|a|G|874

Current chains

Chain a
16S rRNA

Nearby chains

Chain e
30S ribosomal protein S5
Chain h
30S ribosomal protein S8
Chain r
30S ribosomal protein S18

Coloring options:

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