IL_8GLP_065

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

CUCGCAGACCCGAGCCACG*CG

Length

21 nucleotides

Bulged bases

8GLP|1|L5|C|1718

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GLP|1|L5|C|1694
8GLP|1|L5|U|1695
8GLP|1|L5|C|1696
8GLP|1|L5|G|1697
8GLP|1|L5|C|1698
8GLP|1|L5|A|1699
8GLP|1|L5|G|1700
8GLP|1|L5|A|1701
8GLP|1|L5|C|1702
8GLP|1|L5|C|1703
8GLP|1|L5|C|1704
8GLP|1|L5|G|1705
8GLP|1|L5|A|1706
8GLP|1|L5|G|1716
8GLP|1|L5|C|1717
8GLP|1|L5|C|1718
8GLP|1|L5|A|1719
8GLP|1|L5|C|1720
8GLP|1|L5|G|1721
*
8GLP|1|L5|C|1841
8GLP|1|L5|G|1842

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29