IL_8GLP_201

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

GCCACUU*AUGCCGAC

Length

15 nucleotides

Bulged bases

8GLP|1|S2|C|139, 8GLP|1|S2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GLP|1|S2|G|130
8GLP|1|S2|C|139
8GLP|1|S2|C|140
8GLP|1|S2|A|141
8GLP|1|S2|C|142
8GLP|1|S2|U|143
8GLP|1|S2|U|144
*
8GLP|1|S2|A|175
8GLP|1|S2|U|176
8GLP|1|S2|G|177
8GLP|1|S2|C|178
8GLP|1|S2|C|179
8GLP|1|S2|G|180
8GLP|1|S2|A|181
8GLP|1|S2|C|182

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S6