IL_8GLP_202

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

UGGAUAAC*GCUAA(OMU)A(OMC)A

Length

17 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GLP|1|S2|U|144
8GLP|1|S2|G|145
8GLP|1|S2|G|146
8GLP|1|S2|A|147
8GLP|1|S2|U|148
8GLP|1|S2|A|149
8GLP|1|S2|A|150
8GLP|1|S2|C|151
*
8GLP|1|S2|G|167
8GLP|1|S2|C|168
8GLP|1|S2|U|169
8GLP|1|S2|A|170
8GLP|1|S2|A|171
8GLP|1|S2|OMU|172
8GLP|1|S2|A|173
8GLP|1|S2|OMC|174
8GLP|1|S2|A|175

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24