IL_8GLP_226

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

GUU(A2M)AAA*UC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

8GLP|1|S2|G|665
8GLP|1|S2|U|666
8GLP|1|S2|U|667
8GLP|1|S2|A2M|668
8GLP|1|S2|A|669
8GLP|1|S2|A|670
8GLP|1|S2|A|671
*
8GLP|1|S2|U|1161
8GLP|1|S2|C|1162

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SX

40S ribosomal protein S23 (uS12)

Chain Sa

40S ribosomal protein S26