IL_8GLP_262

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

GU(PSU)GG*CGA(A2M)C

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GLP|1|S2|G|1345
8GLP|1|S2|U|1346
8GLP|1|S2|PSU|1347
8GLP|1|S2|G|1348
8GLP|1|S2|G|1349
*
8GLP|1|S2|C|1380
8GLP|1|S2|G|1381
8GLP|1|S2|A|1382
8GLP|1|S2|A2M|1383
8GLP|1|S2|C|1384

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SA

40S ribosomal protein SA

Chain SC

40S ribosomal protein S2

Chain SD

40S ribosomal protein S3

Chain SR

40S ribosomal protein S17