IL_8GLP_286
3D structure
- PDB id
- 8GLP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- C(4AC)G*CGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8GLP_286 not in the Motif Atlas
- Geometric match to IL_4WF9_042
- Geometric discrepancy: 0.1094
- The information below is about IL_4WF9_042
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
8GLP|1|S2|C|1841
8GLP|1|S2|4AC|1842
8GLP|1|S2|G|1843
*
8GLP|1|S2|C|1856
8GLP|1|S2|G|1857
8GLP|1|S2|G|1858
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain Ln
- 60S ribosomal protein L41
- Chain SO
- 40S ribosomal protein S14
- Chain Sa
- 40S ribosomal protein S26
Coloring options: