IL_8GLP_308
3D structure
- PDB id
- 8GLP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- (OMG)AG*UUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8GLP_308 not in the Motif Atlas
- Homologous match to IL_8C3A_101
- Geometric discrepancy: 0.4583
- The information below is about IL_8C3A_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76273.2
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 14
Unit IDs
8GLP|1|L5|OMG|3944
8GLP|1|L5|A|3945
8GLP|1|L5|G|3946
*
8GLP|1|L5|U|4067
8GLP|1|L5|U|4068
8GLP|1|L5|U|4069
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain Li
- 60S ribosomal protein L36
- Chain SB
- 40S ribosomal protein S3a
Coloring options: