IL_8GXB_002
3D structure
- PDB id
- 8GXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of NAD+ -II riboswitch in complex with NAD+
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.15 Å
Loop
- Sequence
- GUUACGUCCGAAAG*CAC
- Length
- 17 nucleotides
- Bulged bases
- 8GXB|1|A|A|9, 8GXB|1|A|A|16
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96303.1
- Basepair signature
- cWW-cSH-tSW-tHW-cWW-L-L-R-L-R
- Number of instances in this motif group
- 3
Unit IDs
8GXB|1|A|G|6
8GXB|1|A|U|7
8GXB|1|A|U|8
8GXB|1|A|A|9
8GXB|1|A|C|10
8GXB|1|A|G|11
8GXB|1|A|U|12
8GXB|1|A|C|13
8GXB|1|A|C|14
8GXB|1|A|G|15
8GXB|1|A|A|16
8GXB|1|A|A|17
8GXB|1|A|A|18
8GXB|1|A|G|19
*
8GXB|1|A|C|38
8GXB|1|A|A|39
8GXB|1|A|C|40
Current chains
- Chain A
- NAD+ II riboswitch
Nearby chains
- Chain B
- NAD+ II riboswitch
- Chain C
- U1 small nuclear ribonucleoprotein A
- Chain F
- U1 small nuclear ribonucleoprotein A
Coloring options: