IL_8HFR_009

3D structure

PDB id

8HFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

NPC-trapped pre-60S particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

UGGG*CUUUGUA

Length

11 nucleotides

Bulged bases

8HFR|1|1e|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HFR|1|1e|U|169
8HFR|1|1e|G|170
8HFR|1|1e|G|171
8HFR|1|1e|G|172
*
8HFR|1|1e|C|247
8HFR|1|1e|U|248
8HFR|1|1e|U|249
8HFR|1|1e|U|250
8HFR|1|1e|G|251
8HFR|1|1e|U|252
8HFR|1|1e|A|253

Current chains

Chain 1e

25S ribosomal RNA

Nearby chains

Chain Hj

60S ribosomal protein L8-A

Chain LL

60S ribosomal protein L13-A

Chain h1

60S ribosomal protein L35-A