IL_8HFR_017
3D structure
- PDB id
- 8HFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NPC-trapped pre-60S particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- CAGACG*CAUAAUG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8HFR|1|1e|C|435
8HFR|1|1e|A|436
8HFR|1|1e|G|437
8HFR|1|1e|A|438
8HFR|1|1e|C|439
8HFR|1|1e|G|495
*
8HFR|1|1e|C|618
8HFR|1|1e|A|619
8HFR|1|1e|U|620
8HFR|1|1e|A|621
8HFR|1|1e|A|622
8HFR|1|1e|U|623
8HFR|1|1e|G|624
Current chains
- Chain 1e
- 25S ribosomal RNA
Nearby chains
- Chain F8
- 60S ribosomal protein L6-A
- Chain Pv
- 60S ribosomal protein L17-A
- Chain eH
- 60S ribosomal protein L32
- Chain f7
- 60S ribosomal protein L33-A
- Chain qJ
- Ribosome biogenesis protein ALB1
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