IL_8HFR_036

3D structure

PDB id

8HFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

NPC-trapped pre-60S particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CGUAU*AAG

Length

8 nucleotides

Bulged bases

8HFR|1|1e|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HFR|1|1e|C|977
8HFR|1|1e|G|978
8HFR|1|1e|U|979
8HFR|1|1e|A|980
8HFR|1|1e|U|981
*
8HFR|1|1e|A|1102
8HFR|1|1e|A|1103
8HFR|1|1e|G|1104

Current chains

Chain 1e

25S ribosomal RNA

Nearby chains

Chain Gu

60S ribosomal protein L7-A

Chain Qk

60S ribosomal protein L18-A

Chain b3

60S ribosomal protein L29