IL_8HFR_063

3D structure

PDB id

8HFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

NPC-trapped pre-60S particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

UUCUUC*GGAAUAG

Length

13 nucleotides

Bulged bases

8HFR|1|1e|U|1629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HFR|1|1e|U|1626
8HFR|1|1e|U|1627
8HFR|1|1e|C|1628
8HFR|1|1e|U|1629
8HFR|1|1e|U|1630
8HFR|1|1e|C|1631
*
8HFR|1|1e|G|1811
8HFR|1|1e|G|1812
8HFR|1|1e|A|1813
8HFR|1|1e|A|1814
8HFR|1|1e|U|1815
8HFR|1|1e|A|1816
8HFR|1|1e|G|1817

Current chains

Chain 1e

25S ribosomal RNA

Nearby chains

Chain Zq

60S ribosomal protein L27-A