IL_8HFR_079

3D structure

PDB id

8HFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

NPC-trapped pre-60S particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

UGGUGGG*CUGCUA

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HFR|1|1e|U|2001
8HFR|1|1e|G|2002
8HFR|1|1e|G|2003
8HFR|1|1e|U|2004
8HFR|1|1e|G|2005
8HFR|1|1e|G|2006
8HFR|1|1e|G|2007
*
8HFR|1|1e|C|2015
8HFR|1|1e|U|2016
8HFR|1|1e|G|2017
8HFR|1|1e|C|2018
8HFR|1|1e|U|2019
8HFR|1|1e|A|2020

Current chains

Chain 1e

25S ribosomal RNA

Nearby chains

Chain pT

Probable metalloprotease ARX1