IL_8HFR_082

3D structure

PDB id

8HFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

NPC-trapped pre-60S particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CUG*CGUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HFR|1|1e|C|2192
8HFR|1|1e|U|2193
8HFR|1|1e|G|2194
*
8HFR|1|1e|C|2248
8HFR|1|1e|G|2273
8HFR|1|1e|U|2274
8HFR|1|1e|G|2315

Current chains

Chain 1e

25S ribosomal RNA

Nearby chains

Chain B4

60S ribosomal protein L2-A

Chain xI

Shuttling pre-60S factor ECM1