IL_8HFR_141
3D structure
- PDB id
- 8HFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NPC-trapped pre-60S particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UGAUUAGAGGUUCC*GACCUAUUCUCA
- Length
- 26 nucleotides
- Bulged bases
- 8HFR|1|1e|G|1010, 8HFR|1|1e|U|1015, 8HFR|1|1e|C|1016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8HFR|1|1e|U|1004
8HFR|1|1e|G|1005
8HFR|1|1e|A|1006
8HFR|1|1e|U|1007
8HFR|1|1e|U|1008
8HFR|1|1e|A|1009
8HFR|1|1e|G|1010
8HFR|1|1e|A|1011
8HFR|1|1e|G|1012
8HFR|1|1e|G|1013
8HFR|1|1e|U|1014
8HFR|1|1e|U|1015
8HFR|1|1e|C|1016
8HFR|1|1e|C|1017
*
8HFR|1|1e|G|1035
8HFR|1|1e|A|1036
8HFR|1|1e|C|1037
8HFR|1|1e|C|1038
8HFR|1|1e|U|1039
8HFR|1|1e|A|1040
8HFR|1|1e|U|1041
8HFR|1|1e|U|1042
8HFR|1|1e|C|1043
8HFR|1|1e|U|1044
8HFR|1|1e|C|1045
8HFR|1|1e|A|1046
Current chains
- Chain 1e
- 25S ribosomal RNA
Nearby chains
- Chain Ez
- 60S ribosomal protein L5
- Chain Jy
- 60S ribosomal protein L11-A
- Chain sm
- Translation machinery-associated protein 16
- Chain vV
- 60S ribosomal export protein NMD3
Coloring options: