IL_8HL2_011

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CAUCAG*CUAUAACG

Length

14 nucleotides

Bulged bases

8HL2|1|A16S|U|256, 8HL2|1|A16S|U|292

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|C|254
8HL2|1|A16S|A|255
8HL2|1|A16S|U|256
8HL2|1|A16S|C|257
8HL2|1|A16S|A|258
8HL2|1|A16S|G|259
*
8HL2|1|A16S|C|289
8HL2|1|A16S|U|290
8HL2|1|A16S|A|291
8HL2|1|A16S|U|292
8HL2|1|A16S|A|293
8HL2|1|A16S|A|294
8HL2|1|A16S|C|295
8HL2|1|A16S|G|296

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain A23S

Large subunit ribosomal RNA; LSU rRNA

Chain AS8E

30S ribosomal protein S8e

Chain S12P

30S ribosomal protein S12

Chain S17P

30S ribosomal protein S17