IL_8HL2_039

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GUAUGACG*CUGAC

Length

13 nucleotides

Bulged bases

8HL2|1|A16S|U|971, 8HL2|1|A16S|U|973

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|970
8HL2|1|A16S|U|971
8HL2|1|A16S|A|972
8HL2|1|A16S|U|973
8HL2|1|A16S|G|974
8HL2|1|A16S|A|975
8HL2|1|A16S|C|976
8HL2|1|A16S|G|977
*
8HL2|1|A16S|C|997
8HL2|1|A16S|U|998
8HL2|1|A16S|G|999
8HL2|1|A16S|A|1000
8HL2|1|A16S|C|1001

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain S14P

30S ribosomal protein S14 type Z

Chain S27A

30S ribosomal protein S27ae

Chain SL7A

50S ribosomal protein L7Ae