IL_8HL2_043

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGC*GUCAGC

Length

9 nucleotides

Bulged bases

8HL2|1|A16S|C|1170, 8HL2|1|A16S|A|1171

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|1021
8HL2|1|A16S|G|1022
8HL2|1|A16S|C|1023
*
8HL2|1|A16S|G|1168
8HL2|1|A16S|U|1169
8HL2|1|A16S|C|1170
8HL2|1|A16S|A|1171
8HL2|1|A16S|G|1172
8HL2|1|A16S|C|1173

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AS3P

30S ribosomal protein S3

Chain S10P

30S ribosomal protein S10

Chain S14P

30S ribosomal protein S14 type Z