IL_8HL2_048

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGUAUUCUG*CAGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|1091
8HL2|1|A16S|G|1092
8HL2|1|A16S|U|1093
8HL2|1|A16S|A|1094
8HL2|1|A16S|U|1095
8HL2|1|A16S|U|1096
8HL2|1|A16S|C|1097
8HL2|1|A16S|U|1098
8HL2|1|A16S|G|1099
*
8HL2|1|A16S|C|1110
8HL2|1|A16S|A|1111
8HL2|1|A16S|G|1112
8HL2|1|A16S|A|1113
8HL2|1|A16S|A|1114
8HL2|1|A16S|C|1115

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AS9P

30S ribosomal protein S9

Chain S19E

30S ribosomal protein S19e