IL_8HL2_050

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GACAACG*CUUAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|1217
8HL2|1|A16S|A|1218
8HL2|1|A16S|C|1219
8HL2|1|A16S|A|1220
8HL2|1|A16S|A|1221
8HL2|1|A16S|C|1222
8HL2|1|A16S|G|1223
*
8HL2|1|A16S|C|1253
8HL2|1|A16S|U|1254
8HL2|1|A16S|U|1255
8HL2|1|A16S|A|1256
8HL2|1|A16S|A|1257
8HL2|1|A16S|A|1258
8HL2|1|A16S|C|1259

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AS3P

30S ribosomal protein S3

Chain AS7P

30S ribosomal protein S7

Chain AS9P

30S ribosomal protein S9

Chain S10P

30S ribosomal protein S10

Chain S14P

30S ribosomal protein S14 type Z

Chain S19E

30S ribosomal protein S19e