IL_8HL2_052

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAUG*CCAAUC

Length

10 nucleotides

Bulged bases

8HL2|1|A16S|A|1250, 8HL2|1|A16S|U|1251

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|1225
8HL2|1|A16S|A|1226
8HL2|1|A16S|U|1227
8HL2|1|A16S|G|1228
*
8HL2|1|A16S|C|1247
8HL2|1|A16S|C|1248
8HL2|1|A16S|A|1249
8HL2|1|A16S|A|1250
8HL2|1|A16S|U|1251
8HL2|1|A16S|C|1252

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AS3P

30S ribosomal protein S3

Chain S10P

30S ribosomal protein S10

Chain S14P

30S ribosomal protein S14 type Z

Chain S19E

30S ribosomal protein S19e