IL_8HL2_054

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGGAUC*GUGAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|G|1272
8HL2|1|A16S|G|1273
8HL2|1|A16S|G|1274
8HL2|1|A16S|A|1275
8HL2|1|A16S|U|1276
8HL2|1|A16S|C|1277
*
8HL2|1|A16S|G|1298
8HL2|1|A16S|U|1299
8HL2|1|A16S|G|1300
8HL2|1|A16S|A|1301
8HL2|1|A16S|A|1302
8HL2|1|A16S|C|1303

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AS7P

30S ribosomal protein S7

Chain S13P

30S ribosomal protein S13

Chain S19E

30S ribosomal protein S19e