IL_8HL2_062

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

UGAG*CGAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A16S|U|1400
8HL2|1|A16S|G|1401
8HL2|1|A16S|A|1402
8HL2|1|A16S|G|1403
*
8HL2|1|A16S|C|1427
8HL2|1|A16S|G|1428
8HL2|1|A16S|A|1429
8HL2|1|A16S|A|1430

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain A23S

Large subunit ribosomal RNA; LSU rRNA

Chain AS6E

30S ribosomal protein S6e

Chain AS8E

30S ribosomal protein S8e