IL_8HL2_106
3D structure
- PDB id
- 8HL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CUAAGUG*CUCAAG
- Length
- 13 nucleotides
- Bulged bases
- 8HL2|1|A23S|C|1282, 8HL2|1|A23S|A|1284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8HL2_106 not in the Motif Atlas
- Geometric match to IL_4WF9_039
- Geometric discrepancy: 0.1539
- The information below is about IL_4WF9_039
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
8HL2|1|A23S|C|1154
8HL2|1|A23S|U|1155
8HL2|1|A23S|A|1156
8HL2|1|A23S|A|1157
8HL2|1|A23S|G|1158
8HL2|1|A23S|U|1159
8HL2|1|A23S|G|1160
*
8HL2|1|A23S|C|1280
8HL2|1|A23S|U|1281
8HL2|1|A23S|C|1282
8HL2|1|A23S|A|1283
8HL2|1|A23S|A|1284
8HL2|1|A23S|G|1285
Current chains
- Chain A23S
- 23s rRNA (3000-MER)
Nearby chains
- Chain AL6P
- 50S ribosomal protein L6
- Chain ALX0
- 50S ribosomal protein L18Ae
- Chain L13P
- 50S ribosomal protein L13
- Chain L142
- 50S ribosomal protein L14e
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