IL_8HL2_137

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAAAUC*GGCGAAGCC

Length

15 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A23S|G|1993
8HL2|1|A23S|A|1997
8HL2|1|A23S|A|1998
8HL2|1|A23S|A|1999
8HL2|1|A23S|U|2000
8HL2|1|A23S|C|2001
*
8HL2|1|A23S|G|2014
8HL2|1|A23S|G|2015
8HL2|1|A23S|C|2016
8HL2|1|A23S|G|2017
8HL2|1|A23S|A|2018
8HL2|1|A23S|A|2019
8HL2|1|A23S|G|2020
8HL2|1|A23S|C|2021
8HL2|1|A23S|C|2022

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains

Chain A16S

Small subunit ribosomal RNA; SSU rRNA

Chain AETN

Transfer RNA; tRNA

Chain AL2P

50S ribosomal protein L2