IL_8HL2_146

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GCGUAGAGUAG*CC

Length

13 nucleotides

Bulged bases

8HL2|1|A23S|C|2240, 8HL2|1|A23S|A|2245, 8HL2|1|A23S|U|2247

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A23S|G|2239
8HL2|1|A23S|C|2240
8HL2|1|A23S|G|2241
8HL2|1|A23S|U|2242
8HL2|1|A23S|A|2243
8HL2|1|A23S|G|2244
8HL2|1|A23S|A|2245
8HL2|1|A23S|G|2246
8HL2|1|A23S|U|2247
8HL2|1|A23S|A|2248
8HL2|1|A23S|G|2249
*
8HL2|1|A23S|C|2307
8HL2|1|A23S|C|2308

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains

Chain AETN

Transfer RNA; tRNA

Chain AL1P

50S ribosomal protein L1