IL_8HL4_095
3D structure
- PDB id
- 8HL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.62 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8HL4|1|A23S|G|912, 8HL4|1|A23S|A|924, 8HL4|1|A23S|A|925, 8HL4|1|A23S|U|926
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8HL4_095 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0967
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8HL4|1|A23S|G|911
8HL4|1|A23S|G|912
8HL4|1|A23S|G|913
*
8HL4|1|A23S|C|923
8HL4|1|A23S|A|924
8HL4|1|A23S|A|925
8HL4|1|A23S|U|926
8HL4|1|A23S|C|927
Current chains
- Chain A23S
- 23s rRNA (3000-MER)
Nearby chains
- Chain AL2P
- 50S ribosomal protein L2
- Chain L15E
- 50S ribosomal protein L15e
- Chain L22P
- 50S ribosomal protein L22
- Chain L37E
- 50S ribosomal protein L37e
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