IL_8HNT_001

3D structure

PDB id

8HNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of anti-CRISPR protein AcrIIC4 bound to HpaCas9-sgRNA surveillance complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.06 Å

Loop

Sequence

CUCC*GUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

8HNT|1|B|C|32
8HNT|1|B|U|33
8HNT|1|B|C|34
8HNT|1|B|C|35
*
8HNT|1|B|G|54
8HNT|1|B|U|55
8HNT|1|B|U|56
8HNT|1|B|G|57

Current chains

Chain B

sgRNA

Nearby chains

Chain A

CRISPR-associated endonuclease Cas9