IL_8HNT_002

3D structure

PDB id

8HNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of anti-CRISPR protein AcrIIC4 bound to HpaCas9-sgRNA surveillance complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.06 Å

Loop

Sequence

GCUCU*AUC

Length

8 nucleotides

Bulged bases

8HNT|1|B|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.10

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

16

Unit IDs

8HNT|1|B|G|87
8HNT|1|B|C|88
8HNT|1|B|U|89
8HNT|1|B|C|90
8HNT|1|B|U|91
*
8HNT|1|B|A|120
8HNT|1|B|U|121
8HNT|1|B|C|122

Current chains

Chain B

sgRNA

Nearby chains

Chain A

CRISPR-associated endonuclease Cas9

Chain C

anti-CRISPR protein AcrIIC4