IL_8HSP_075

3D structure

PDB id

8HSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8HSP_075 not in the Motif Atlas

Homologous match to IL_5J7L_254

Geometric discrepancy: 0.1059

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

8HSP|1|a|U|293
8HSP|1|a|A|294
8HSP|1|a|G|295
*
8HSP|1|a|C|343
8HSP|1|a|A|344
8HSP|1|a|A|345
8HSP|1|a|A|346
8HSP|1|a|A|347

Current chains

Chain a

23S rRNA

Nearby chains

Chain t

50S ribosomal protein L24