IL_8HSP_165
3D structure
- PDB id
- 8HSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GAUAAG*CGAAAC
- Length
- 12 nucleotides
- Bulged bases
- 8HSP|1|a|A|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8HSP_165 not in the Motif Atlas
- Homologous match to IL_5J7L_350
- Geometric discrepancy: 0.0634
- The information below is about IL_5J7L_350
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.8
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
8HSP|1|a|G|2737
8HSP|1|a|A|2738
8HSP|1|a|U|2739
8HSP|1|a|A|2740
8HSP|1|a|A|2741
8HSP|1|a|G|2742
*
8HSP|1|a|C|2762
8HSP|1|a|G|2763
8HSP|1|a|A|2764
8HSP|1|a|A|2765
8HSP|1|a|A|2766
8HSP|1|a|C|2767
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain g
- 50S ribosomal protein L6
- Chain i
- 50S ribosomal protein L13
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