IL_8HTZ_118

3D structure

PDB id

8HTZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

8HTZ|1|a|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8HTZ_118 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.0649

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8HTZ|1|a|C|1437
8HTZ|1|a|U|1438
8HTZ|1|a|A|1439
8HTZ|1|a|U|1440
*
8HTZ|1|a|A|1551
8HTZ|1|a|A|1552
8HTZ|1|a|A|1553
8HTZ|1|a|U|1554
8HTZ|1|a|G|1555

Current chains

Chain a

23S rRNA

Nearby chains