IL_8HU1_084

3D structure

PDB id

8HU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8HU1_084 not in the Motif Atlas

Geometric match to IL_7RQB_021

Geometric discrepancy: 0.085

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

8HU1|1|a|U|703
8HU1|1|a|G|704
8HU1|1|a|A|705
8HU1|1|a|A|706
8HU1|1|a|G|707
*
8HU1|1|a|U|724
8HU1|1|a|G|725
8HU1|1|a|G|726
8HU1|1|a|A|727
8HU1|1|a|G|728

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2