IL_8I0P_006

3D structure

PDB id

8I0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of human pre-Bact complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UCG*CA

Length

5 nucleotides

Bulged bases

8I0P|1|F|C|6

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8I0P_006 not in the Motif Atlas

Geometric match to IL_8GLP_165

Geometric discrepancy: 0.3399

The information below is about IL_8GLP_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05642.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

67

Unit IDs

8I0P|1|F|U|5
8I0P|1|F|C|6
8I0P|1|F|G|7
*
8I0P|1|F|C|14
8I0P|1|F|A|15

Current chains

Chain F

U6 snRNA

Nearby chains

Chain E

U5 small nuclear ribonucleoprotein 40 kDa protein