8I0P Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8I0P_001 | 1/B/37:45 | No text annotation | ||
| HL_8I0P_004 | 1/F/64:70 | GNRA | homologous HL_6ASO_001 HL_34789.6 | |
| HL_8I0P_005 | 1/H/52:61 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8I0P_002 | No text annotation | ||
| HL_8I0P_003 | No text annotation | ||
| HL_8I0P_006 | No text annotation | ||
| HL_8I0P_007 | No text annotation | ||
| HL_8I0P_008 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8I0P_007 | 1/F/57:62, 1/F/72:78 | No text annotation | ||
| IL_8I0P_008 | 1/G/86:91, 1/H/39:43 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.5 | |
| IL_8I0P_009 | 1/G/95:100, 1/H/31:35 | No text annotation | geometric IL_4V88_422 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_8I0P_001 | No text annotation | ||
| IL_8I0P_002 | No text annotation | ||
| IL_8I0P_003 | No text annotation | ||
| IL_8I0P_004 | No text annotation | ||
| IL_8I0P_005 | No text annotation | ||
| IL_8I0P_006 | No text annotation | ||
| IL_8I0P_015 | Isolated non-canonical cWW pair | ||
| IL_8I0P_010 | No text annotation | ||
| IL_8I0P_011 | No text annotation | ||
| IL_8I0P_016 | No text annotation | ||
| IL_8I0P_012 | No text annotation | ||
| IL_8I0P_013 | No text annotation | ||
| IL_8I0P_014 | No text annotation | ||
| IL_8I0P_017 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_8I0P_002 | 1/F/55:57, 1/F/78:86, 1/H/12:20 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_8I0P_001 | No text annotation |
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