IL_8I0W_001
3D structure
- PDB id
- 8I0W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of human C complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAGCC*GAUAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8I0W_001 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.3656
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
8I0W|1|6|G|5
8I0W|1|6|A|6
8I0W|1|6|G|7
8I0W|1|6|C|8
8I0W|1|6|C|9
*
8I0W|1|F|G|38
8I0W|1|F|A|39
8I0W|1|F|U|40
8I0W|1|F|A|41
8I0W|1|F|C|42
Current chains
- Chain 6
- pre-mRNA
- Chain F
- U6 snRNA
Nearby chains
- Chain 1
- WD repeat-containing protein 70
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain L
- Cell division cycle 5-like protein
- Chain Y
- Coiled-coil domain-containing protein 94
- Chain z
- Pre-mRNA-splicing factor ISY1 homolog
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