IL_8I0W_009
3D structure
- PDB id
- 8I0W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of human C complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGCC*GAC
- Length
- 7 nucleotides
- Bulged bases
- 8I0W|1|F|C|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8I0W_009 not in the Motif Atlas
- Geometric match to IL_3TD0_005
- Geometric discrepancy: 0.1287
- The information below is about IL_3TD0_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
8I0W|1|F|G|58
8I0W|1|F|G|59
8I0W|1|F|C|60
8I0W|1|F|C|61
*
8I0W|1|F|G|75
8I0W|1|F|A|76
8I0W|1|F|C|77
Current chains
- Chain F
- U6 snRNA
Nearby chains
- Chain 6
- pre-mRNA
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain H
- U2 splicesomal small nuclear RNA; U2 snRNA
- Chain J
- Crooked neck-like protein 1
- Chain L
- Cell division cycle 5-like protein
- Chain O
- Pre-mRNA-splicing factor RBM22
- Chain R
- SNW domain-containing protein 1
- Chain T
- Pleiotropic regulator 1
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