IL_8I9P_068

3D structure

PDB id

8I9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCCUU*GUGGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8I9P|1|C1|C|1049
8I9P|1|C1|C|1050
8I9P|1|C1|C|1051
8I9P|1|C1|U|1052
8I9P|1|C1|U|1053
*
8I9P|1|C1|G|1069
8I9P|1|C1|U|1070
8I9P|1|C1|G|1071
8I9P|1|C1|G|1072
8I9P|1|C1|G|1073

Current chains

Chain C1

RNA (3341-MER)

Nearby chains

Chain LT

60S ribosomal protein l21-like protein