IL_8IFE_070
3D structure
- PDB id
- 8IFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Arbekacin-added human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.57 Å
Loop
- Sequence
- GAUUA*UUCUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IFE_070 not in the Motif Atlas
- Homologous match to IL_8C3A_044
- Geometric discrepancy: 0.0772
- The information below is about IL_8C3A_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
8IFE|1|1A|G|1745
8IFE|1|1A|A|1746
8IFE|1|1A|U|1747
8IFE|1|1A|U|1748
8IFE|1|1A|A|1749
*
8IFE|1|1A|U|1781
8IFE|1|1A|U|1782
8IFE|1|1A|C|1783
8IFE|1|1A|U|1784
8IFE|1|1A|C|1785
Current chains
- Chain 1A
- 28S ribosomal RNA
Nearby chains
- Chain 1B
- 5S ribosomal RNA; 5S rRNA
- Chain 1G
- 60S ribosomal protein L5
- Chain 2D
- 60S ribosomal protein L10-like
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