IL_8INE_182
3D structure
- PDB id
- 8INE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State G'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAC(B8H)*ACUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: B8H
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INE_182 not in the Motif Atlas
- Geometric match to IL_255D_001
- Geometric discrepancy: 0.3118
- The information below is about IL_255D_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_13404.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
8INE|1|2|C|1857
8INE|1|2|A|1858
8INE|1|2|C|1859
8INE|1|2|B8H|1860
*
8INE|1|2|A|1874
8INE|1|2|C|1875
8INE|1|2|U|1876
8INE|1|2|G|1877
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain C
- 60S ribosomal protein L29
- Chain R
- Translation machinery-associated protein 16
- Chain p
- 60S ribosomal protein L7
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