IL_8INF_001
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 8INF|1|8|C|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INF_001 not in the Motif Atlas
- Homologous match to IL_8C3A_002
- Geometric discrepancy: 0.2082
- The information below is about IL_8C3A_002
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.13
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 40
Unit IDs
8INF|1|2|C|6
8INF|1|2|C|7
*
8INF|1|8|G|149
8INF|1|8|C|150
8INF|1|8|G|151
Current chains
- Chain 2
- 28S rRNA
- Chain 8
- 5.8S rRNA
Nearby chains
- Chain G
- 60S ribosomal protein L7a
- Chain U
- 60S ribosomal protein L15
- Chain g
- 60S ribosomal protein L23a
- Chain v
- Pescadillo homolog
- Chain w
- Ribosome biogenesis protein NOP53
Coloring options: