IL_8INF_045
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAC*GGUCG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INF_045 not in the Motif Atlas
- Geometric match to IL_7VYX_002
- Geometric discrepancy: 0.3177
- The information below is about IL_7VYX_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
8INF|1|2|C|1093
8INF|1|2|G|1094
8INF|1|2|A|1095
8INF|1|2|C|1096
*
8INF|1|2|G|1199
8INF|1|2|G|1200
8INF|1|2|U|1201
8INF|1|2|C|1202
8INF|1|2|G|1203
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain b
- 60S ribosomal protein L18a
- Chain c
- 60S ribosomal protein L21
Coloring options: