IL_8INF_057
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGAUC*G(B8Q)GCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: B8Q
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INF_057 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.2911
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_97631.1
- Basepair signature
- cWW-L-R-L-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
8INF|1|2|G|1425
8INF|1|2|G|1426
8INF|1|2|A|1427
8INF|1|2|U|1428
8INF|1|2|C|1429
*
8INF|1|2|G|1455
8INF|1|2|B8Q|1456
8INF|1|2|G|1457
8INF|1|2|C|1458
8INF|1|2|A|1459
8INF|1|2|C|1460
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L29
- Chain Z
- 60S ribosomal protein L18
Coloring options: