IL_8INF_076
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUUG*C(A2M)GA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INF_076 not in the Motif Atlas
- Geometric match to IL_4EYA_010
- Geometric discrepancy: 0.2978
- The information below is about IL_4EYA_010
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
8INF|1|2|U|1861
8INF|1|2|U|1862
8INF|1|2|U|1863
8INF|1|2|G|1864
*
8INF|1|2|C|1870
8INF|1|2|A2M|1871
8INF|1|2|G|1872
8INF|1|2|A|1873
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain C
- 60S ribosomal protein L29
- Chain R
- Translation machinery-associated protein 16
- Chain f
- Protein SDA1 homolog
Coloring options: